Taipan | Sequencing: De novo genome sequencing ... - OMICtools 31 Oct 2013 ... Taipan. A fast hybrid short-read assembly tool. Visit Taipan ... A genetic sequence assembler capable of assembling millions of small ...
taipan | SourceForge.net 9 Apr 2013 ... Download taipan. A fast hybrid short-read ... Download taipan.tar · Browse All Files ... Ray, a de novo assembler using MPI 2.2. Ray -- Parallel ...
taipan - Browse Files at SourceForge.net Download taipan.tar (102.4 kB). Home ... taipan, 2009-05-15, 1 1 weekly downloads. Recommended Projects. Icon · Ray, a de novo assembler using MPI 2.2.
De Novo Genome Assembly — Parallele und Verteilte Architekturen PASHA is a parallel short read assembler for large genomes using de Bruijn ... Taipan is a fast algorithm for single end short read assembly with Illumina reads.
A Practical Comparison of De Novo Genome Assembly Software ... 14 Mar 2011 ... In terms of software implementation, string-based assemblers are superior .... In the end, the hybrid assembler, Taipan was capable to generate ...
A fast hybrid short read fragment assembly algorithm. 17 Jun 2009 ... In this article, we present Taipan, an assembly algorithm which can be viewed as a hybrid of these two approaches. Taipan uses greedy ...
Taipan - SEQwiki - SEQanswers 28 Dec 2009 ... Summary: Taipan uses greedy extensions for contig construction but at each step realizes enough of the corresponding read graph to make ...
Sequence assembly - Wikipedia, the free encyclopedia Sample sequence showing how a sequence assembler would take fragments and match by overlaps. .... Taipan, (small) genomes, Illumina, Schmidt, B. et al.
Taipan 20090515 – Fast Hybrid Short-read Assembly tool 1 Sep 2012 ... Taipan 20090515 :: DESCRIPTION Taipan is an assembly algorithm which can ... GS De Novo Assembler – de novo DNA Sequence Assembly ...
